Sergiu Ivanov

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~~TRANS~~

===== Introduction to Cytoscape =====

This is a short (3 to 4 hours) lab session in which students learn some basic usage patterns of [[http://cytoscape.org/|Cytoscape]], a state of the art tool for analysis of biological networks. The lab assignment proposes following the [[http://manual.cytoscape.org/en/stable/Basic_Expression_Analysis_Tutorial.html#basic-expression-analysis-tutorial|Cytoscape tutorial]], one of [[http://manual.cytoscape.org/en/stable/Styles.html#styles-tutorials|the tutorials on styles]], and then requires the students to use Cytoscape to analyse a signalling pathway related to breast cancer and to formulate non-trivial conclusions.

The slides defining the objectives of this lab session can be found {{:cytoscape-beam.pdf|here}}.  They are distributed under the [[https://en.wikipedia.org/wiki/Creative_Commons_license|Creative Commons Attribution Alone licence]] {{:ccby.png?60}}.

Sergiu Ivanov

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